CN09_02955 protein (Agrobacterium rhizogenes)

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Score

CN09_02955

RNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (276 aa)

Predicted Functional Partners:

ispDF

0.907

CN09_02950

0.896

nnrD

0.874

pheT

0.864

ribB

0.862

CN09_12395

0.851

CN09_07980

0.820

CN09_01545

0.820

CN09_02945

0.788

CN09_01860

0.769

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01545	CN09_01860	CN09_01545	CN09_01860	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	0.410
CN09_01545	CN09_02955	CN09_01545	CN09_02955	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	RNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.820
CN09_01545	ispDF	CN09_01545	CN09_07765	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF)	0.984
CN09_01860	CN09_01545	CN09_01860	CN09_01545	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.410
CN09_01860	CN09_02955	CN09_01860	CN09_02955	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	RNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.769
CN09_01860	CN09_07980	CN09_01860	CN09_07980	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.410
CN09_01860	CN09_12395	CN09_01860	CN09_12395	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.728
CN09_01860	ispDF	CN09_01860	CN09_07765	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF)	0.914
CN09_01860	nnrD	CN09_01860	CN09_07485	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family	0.999
CN09_01860	pheT	CN09_01860	CN09_13825	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Phenylalanine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	0.568
CN09_01860	ribB	CN09_01860	CN09_16765	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family	0.988
CN09_02945	CN09_02950	CN09_02945	CN09_02950	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.729
CN09_02945	CN09_02955	CN09_02945	CN09_02955	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil	RNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.788
CN09_02945	nnrD	CN09_02945	CN09_07485	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil	Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family	0.533
CN09_02945	pheT	CN09_02945	CN09_13825	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil	Phenylalanine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	0.892
CN09_02945	ribB	CN09_02945	CN09_16765	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family	0.908
CN09_02950	CN09_02945	CN09_02950	CN09_02945	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil	0.729
CN09_02950	CN09_02955	CN09_02950	CN09_02955	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	RNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.896
CN09_02955	CN09_01545	CN09_02955	CN09_01545	RNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.820
CN09_02955	CN09_01860	CN09_02955	CN09_01860	RNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	0.769

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