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CN09_03165 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_03165" - Nitrate ABC transporter substrate-binding protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_03165Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (322 aa)    
Predicted Functional Partners:
CN09_03175
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)
 
     
  0.978
CN09_03185
Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (263 aa)
 
   
  0.950
CN09_03170
Nitrate ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (377 aa)
 
     
  0.947
CN09_03210
Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)
 
          0.815
CN09_03215
Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (453 aa)
 
          0.744
CN09_03180
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (111 aa)
              0.742
CN09_02880
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (288 aa)
 
     
  0.717
CN09_18415
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (270 aa)
 
     
  0.669
CN09_01005
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (270 aa)
 
   
  0.663
CN09_18420
Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (277 aa)
 
   
  0.658
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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