CN09_03200 protein (Agrobacterium rhizogenes)

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CN09_03200

Allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology (417 aa)

Predicted Functional Partners:

CN09_03195

0.999

CN09_03185

0.930

CN09_03210

0.764

CN09_03205

0.653

CN09_23565

0.633

CN09_03675

0.603

CN09_03215

0.578

CN09_03690

0.525

CN09_14395

0.512

CN09_03165

0.509

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_03165	CN09_03185	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.950
CN09_03165	CN09_03195	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Dihydropyrimidinase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.637
CN09_03165	CN09_03200	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology	0.509
CN09_03165	CN09_03205	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.654
CN09_03165	CN09_03210	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology	0.815
CN09_03165	CN09_03215	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.744
CN09_03165	CN09_23565	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Dihydropyrimidinase; Catalyzes the hydrolytic cleavage of imides that range from linear to heterocyclic and that include hydantoins, dihydropyrimidines, and phthalimides; Derived by automated computational analysis using gene prediction method: Protein Homology	0.487
CN09_03185	CN09_03165	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.950
CN09_03185	CN09_03195	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Dihydropyrimidinase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.950
CN09_03185	CN09_03200	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology	0.930
CN09_03185	CN09_03205	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.462
CN09_03185	CN09_03210	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology	0.628
CN09_03185	CN09_03215	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.483
CN09_03185	CN09_23565	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Dihydropyrimidinase; Catalyzes the hydrolytic cleavage of imides that range from linear to heterocyclic and that include hydantoins, dihydropyrimidines, and phthalimides; Derived by automated computational analysis using gene prediction method: Protein Homology	0.403
CN09_03195	CN09_03165	Dihydropyrimidinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.637
CN09_03195	CN09_03185	Dihydropyrimidinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.950
CN09_03195	CN09_03200	Dihydropyrimidinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology	0.999
CN09_03195	CN09_03205	Dihydropyrimidinase; Derived by automated computational analysis using gene prediction method: Protein Homology	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.627
CN09_03195	CN09_03210	Dihydropyrimidinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology	0.950
CN09_03195	CN09_03215	Dihydropyrimidinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.822