CN09_03220 protein (Agrobacterium rhizogenes)

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Score

CN09_03220

Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology (330 aa)

Predicted Functional Partners:

CN09_03225

0.941

CN09_10975

0.758

CN09_03235

0.695

CN09_19725

0.677

CN09_15835

0.633

nnrD

0.625

CN09_07390

0.599

CN09_03230

0.578

CN09_08215

0.563

CN09_10600

0.550

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_03220	CN09_03225	CN09_03220	CN09_03225	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Two-component response regulator; In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; Derived by automated computational analysis using gene prediction method: Protein Homology	0.941
CN09_03220	CN09_03230	CN09_03220	CN09_03230	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.578
CN09_03220	CN09_03235	CN09_03220	CN09_03235	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	0.695
CN09_03220	CN09_07390	CN09_03220	CN09_07390	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.599
CN09_03220	CN09_08215	CN09_03220	CN09_08215	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.563
CN09_03220	CN09_10600	CN09_03220	CN09_10600	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.550
CN09_03220	CN09_10975	CN09_03220	CN09_10975	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.758
CN09_03220	CN09_15835	CN09_03220	CN09_15835	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Cell envelope biogenesis protein AsmA; Derived by automated computational analysis using gene prediction method: Protein Homology	0.633
CN09_03220	CN09_19725	CN09_03220	CN09_19725	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.677
CN09_03220	nnrD	CN09_03220	CN09_07485	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family	0.625
CN09_03225	CN09_03220	CN09_03225	CN09_03220	Two-component response regulator; In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; Derived by automated computational analysis using gene prediction method: Protein Homology	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.941
CN09_03225	CN09_03230	CN09_03225	CN09_03230	Two-component response regulator; In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.795
CN09_03225	CN09_03235	CN09_03225	CN09_03235	Two-component response regulator; In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; Derived by automated computational analysis using gene prediction method: Protein Homology	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	0.990
CN09_03225	CN09_10975	CN09_03225	CN09_10975	Two-component response regulator; In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; Derived by automated computational analysis using gene prediction method: Protein Homology	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.429
CN09_03225	CN09_19725	CN09_03225	CN09_19725	Two-component response regulator; In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; Derived by automated computational analysis using gene prediction method: Protein Homology	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.962
CN09_03230	CN09_03220	CN09_03230	CN09_03220	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.578
CN09_03230	CN09_03225	CN09_03230	CN09_03225	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Two-component response regulator; In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; Derived by automated computational analysis using gene prediction method: Protein Homology	0.795
CN09_03230	CN09_03235	CN09_03230	CN09_03235	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	0.972
CN09_03230	CN09_10600	CN09_03230	CN09_10600	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.484
CN09_03235	CN09_03220	CN09_03235	CN09_03220	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.695

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