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CN09_03295 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_03295" - Antibiotic biosynthesis monooxygenase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
CN09_03295Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (104 aa)    
Predicted Functional Partners:
CN09_03275
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (151 aa)
 
          0.813
CN09_03260
Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
              0.784
hmuV
Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system (263 aa)
              0.784
CN09_03265
Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (351 aa)
              0.771
CN09_03975
Cation transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (740 aa)
              0.652
CN09_03285
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (132 aa)
              0.639
CN09_03280
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (398 aa)
 
          0.578
CN09_06155
Usg; Derived by automated computational analysis using gene prediction method- Protein Homology (88 aa)
   
          0.490
CN09_03255
Iron ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (369 aa)
         
  0.471
CN09_27955
Sugar dehydrogenase; Converts glucose to D-glucono-1,5 lactone; Derived by automated computational analysis using gene prediction method- Protein Homology (251 aa)
              0.430
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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