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CN09_03310 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_03310" - LacI family transcriptional regulator in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_03310LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (346 aa)    
Predicted Functional Partners:
CN09_03315
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (342 aa)
 
     
  0.819
CN09_03320
Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
 
   
  0.791
CN09_23480
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (343 aa)
   
     
  0.773
CN09_22035
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (335 aa)
 
     
  0.745
CN09_03305
Globin; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
              0.600
CN09_03300
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (125 aa)
              0.600
CN09_23825
Periplasmic alpha-galactoside-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (695 aa)
 
          0.515
CN09_01410
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (341 aa)
 
     
  0.481
CN09_13655
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (409 aa)
 
     
  0.466
CN09_23810
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
 
     
  0.450
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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