CN09_03350 protein (Agrobacterium rhizogenes)

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Score

CN09_03350

Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (113 aa)

Predicted Functional Partners:

CN09_03345

0.939

CN09_06935

0.885

CN09_28120

0.726

CN09_03340

0.705

CN09_04425

0.656

CN09_17655

0.655

CN09_06555

0.623

ribB

0.602

CN09_06820

0.600

serS

0.598

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_03340	CN09_03345	CN09_03340	CN09_03345	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.747
CN09_03340	CN09_03350	CN09_03340	CN09_03350	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.705
CN09_03345	CN09_03340	CN09_03345	CN09_03340	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily	0.747
CN09_03345	CN09_03350	CN09_03345	CN09_03350	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.939
CN09_03350	CN09_03340	CN09_03350	CN09_03340	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily	0.705
CN09_03350	CN09_03345	CN09_03350	CN09_03345	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.939
CN09_03350	CN09_04425	CN09_03350	CN09_04425	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Thioredoxin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family	0.656
CN09_03350	CN09_06555	CN09_03350	CN09_06555	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Isocitrate dehydrogenase [NADP]; Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the isocitrate and isopropylmalate dehydrogenases family	0.623
CN09_03350	CN09_06820	CN09_03350	CN09_06820	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.600
CN09_03350	CN09_06935	CN09_03350	CN09_06935	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Molecular chaperone; Derived by automated computational analysis using gene prediction method- Protein Homology	0.885
CN09_03350	CN09_17655	CN09_03350	CN09_17655	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method- Protein Homology	0.655
CN09_03350	CN09_28120	CN09_03350	CN09_28120	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method- Protein Homology	0.726
CN09_03350	ribB	CN09_03350	CN09_16765	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family	0.602
CN09_03350	serS	CN09_03350	CN09_08285	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)	0.598
CN09_04425	CN09_03350	CN09_04425	CN09_03350	Thioredoxin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.656
CN09_04425	CN09_17655	CN09_04425	CN09_17655	Thioredoxin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family	DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method- Protein Homology	0.652
CN09_04425	ribB	CN09_04425	CN09_16765	Thioredoxin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family	0.423
CN09_04425	serS	CN09_04425	CN09_08285	Thioredoxin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family	Serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)	0.859
CN09_06555	CN09_03350	CN09_06555	CN09_03350	Isocitrate dehydrogenase [NADP]; Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the isocitrate and isopropylmalate dehydrogenases family	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.623
CN09_06555	CN09_06820	CN09_06555	CN09_06820	Isocitrate dehydrogenase [NADP]; Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the isocitrate and isopropylmalate dehydrogenases family	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.553

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