STRINGSTRING
CN09_03385 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_03385" - Sterol desaturase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
CN09_03385Sterol desaturase; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)    
Predicted Functional Partners:
CN09_08245
Phytoene synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (286 aa)
   
 
  0.814
CN09_01825
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1574 aa)
           
  0.794
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
 
     
  0.746
CN09_28665
Fatty acid desaturase; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)
 
   
  0.717
CN09_11710
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (315 aa)
     
 
  0.714
CN09_01535
Cytochrome C peroxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (461 aa)
 
          0.675
CN09_14095
Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology (425 aa)
              0.652
CN09_14090
Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (519 aa)
              0.652
CN09_08570
Molybdenum cofactor biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (257 aa)
              0.630
CN09_01180
CysZ-like protein; Role in sulfur assimilation; Derived by automated computational analysis using gene prediction method- Protein Homology (237 aa)
              0.581
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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