CN09_03655 protein (Agrobacterium rhizogenes)

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CN09_03655

5-methylaminomethyl-2-thiouridine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)

Predicted Functional Partners:

CN09_10375

0.929

CN09_03660

0.929

guaB

0.841

CN09_23670

0.744

CN09_15290

0.741

CN09_15500

0.702

CN09_28045

0.701

mnmE

0.653

CN09_28270

0.652

ispDF

0.652

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_03655	CN09_03660	CN09_03655	CN09_03660	5-methylaminomethyl-2-thiouridine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	D-amino acid oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.929
CN09_03655	CN09_10375	CN09_03655	CN09_10375	5-methylaminomethyl-2-thiouridine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	0.929
CN09_03655	CN09_15290	CN09_03655	CN09_15290	5-methylaminomethyl-2-thiouridine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.741
CN09_03655	CN09_15500	CN09_03655	CN09_15500	5-methylaminomethyl-2-thiouridine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Motility protein A; Derived by automated computational analysis using gene prediction method- Protein Homology	0.702
CN09_03655	CN09_23670	CN09_03655	CN09_23670	5-methylaminomethyl-2-thiouridine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_03655	CN09_28045	CN09_03655	CN09_28045	5-methylaminomethyl-2-thiouridine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; Derived by automated computational analysis using gene prediction method- Protein Homology	0.701
CN09_03655	CN09_28270	CN09_03655	CN09_28270	5-methylaminomethyl-2-thiouridine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Probable intracellular septation protein A; Involved in cell division; probably involved in intracellular septation	0.652
CN09_03655	guaB	CN09_03655	CN09_16005	5-methylaminomethyl-2-thiouridine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family	0.841
CN09_03655	ispDF	CN09_03655	CN09_07765	5-methylaminomethyl-2-thiouridine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF)	0.652
CN09_03655	mnmE	CN09_03655	CN09_17730	5-methylaminomethyl-2-thiouridine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. TrmE GTPase family	0.653
CN09_03660	CN09_03655	CN09_03660	CN09_03655	D-amino acid oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	5-methylaminomethyl-2-thiouridine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.929
CN09_03660	CN09_23670	CN09_03660	CN09_23670	D-amino acid oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.837
CN09_10375	CN09_03655	CN09_10375	CN09_03655	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	5-methylaminomethyl-2-thiouridine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.929
CN09_10375	CN09_15290	CN09_10375	CN09_15290	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_10375	CN09_23670	CN09_10375	CN09_23670	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.406
CN09_10375	guaB	CN09_10375	CN09_16005	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family	0.999
CN09_10375	ispDF	CN09_10375	CN09_07765	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF)	0.999
CN09_10375	mnmE	CN09_10375	CN09_17730	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. TrmE GTPase family	0.994
CN09_15290	CN09_03655	CN09_15290	CN09_03655	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	5-methylaminomethyl-2-thiouridine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.741
CN09_15290	CN09_10375	CN09_15290	CN09_10375	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	0.999

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