CN09_03770 protein (Agrobacterium rhizogenes)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CN09_03770

Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (124 aa)

Predicted Functional Partners:

CN09_03775

0.984

CN09_03780

0.891

CN09_11675

0.862

CN09_02125

0.842

CN09_00480

0.827

CN09_11670

0.775

CN09_11665

0.769

CN09_03765

0.656

CN09_00405

0.490

CN09_12225

0.475

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

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node1	node2	node1 annotation	node2 annotation	score
CN09_00405	CN09_00480	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.447
CN09_00405	CN09_02125	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family	0.419
CN09_00405	CN09_03770	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.490
CN09_00405	CN09_03775	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	0.442
CN09_00405	CN09_11670	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.408
CN09_00405	CN09_11675	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family	0.440
CN09_00480	CN09_00405	Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.447
CN09_00480	CN09_02125	Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family	0.479
CN09_00480	CN09_03770	Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.827
CN09_00480	CN09_03775	Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	0.516
CN09_00480	CN09_03780	Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology	Polyketide cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.573
CN09_00480	CN09_11675	Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family	0.456
CN09_00480	CN09_12225	Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.473
CN09_02125	CN09_00405	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.419
CN09_02125	CN09_00480	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family	Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.479
CN09_02125	CN09_03770	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.842
CN09_02125	CN09_03780	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family	Polyketide cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.421
CN09_02125	CN09_11665	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.836
CN09_02125	CN09_11670	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family	Dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.837
CN09_02125	CN09_12225	RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.516