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CN09_03815 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_03815" - NnrU family protein in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_03815NnrU family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (193 aa)    
Predicted Functional Partners:
CN09_03820
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
              0.878
der
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis (475 aa)
              0.872
CN09_17890
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (68 aa)
              0.744
CN09_17885
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the HpcH/HpaI aldolase family (304 aa)
              0.744
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (520 aa)
              0.744
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate; Belongs to the PanB family (273 aa)
              0.744
CN09_28025
Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (132 aa)
              0.698
CN09_03810
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
              0.586
CN09_28015
Succinate dehydrogenase flavoprotein subunit; Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the FAD-depe [...] (613 aa)
              0.581
CN09_16365
Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method- Protein Homology (201 aa)
 
          0.487
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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