Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CN09_03855 | CN09_03865 | CN09_03855 | CN09_03865 | Abc transporter atp-binding protein; Belongs to the ABC transporter superfamily | Peptide ABC transporter permease; With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.971 |
| CN09_03855 | CN09_03875 | CN09_03855 | CN09_03875 | Abc transporter atp-binding protein; Belongs to the ABC transporter superfamily | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.906 |
| CN09_03855 | oppB | CN09_03855 | CN09_03870 | Abc transporter atp-binding protein; Belongs to the ABC transporter superfamily | Oligopeptide transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.965 |
| CN09_03855 | oppD | CN09_03855 | CN09_03860 | Abc transporter atp-binding protein; Belongs to the ABC transporter superfamily | Oligopeptide transporter atp-binding component; Belongs to the ABC transporter superfamily | 0.909 |
| CN09_03865 | CN09_03855 | CN09_03865 | CN09_03855 | Peptide ABC transporter permease; With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology | Abc transporter atp-binding protein; Belongs to the ABC transporter superfamily | 0.971 |
| CN09_03865 | CN09_03875 | CN09_03865 | CN09_03875 | Peptide ABC transporter permease; With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.958 |
| CN09_03865 | oppB | CN09_03865 | CN09_03870 | Peptide ABC transporter permease; With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology | Oligopeptide transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.994 |
| CN09_03865 | oppD | CN09_03865 | CN09_03860 | Peptide ABC transporter permease; With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology | Oligopeptide transporter atp-binding component; Belongs to the ABC transporter superfamily | 0.972 |
| CN09_03875 | CN09_03855 | CN09_03875 | CN09_03855 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Abc transporter atp-binding protein; Belongs to the ABC transporter superfamily | 0.906 |
| CN09_03875 | CN09_03865 | CN09_03875 | CN09_03865 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Peptide ABC transporter permease; With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.958 |
| CN09_03875 | CN09_06045 | CN09_03875 | CN09_06045 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Sugar abc transporter permease; Transport permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.838 |
| CN09_03875 | ccmB | CN09_03875 | CN09_28245 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Heme transporter; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes | 0.862 |
| CN09_03875 | gcvP | CN09_03875 | CN09_06885 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | 0.825 |
| CN09_03875 | oppB | CN09_03875 | CN09_03870 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Oligopeptide transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.989 |
| CN09_03875 | oppD | CN09_03875 | CN09_03860 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Oligopeptide transporter atp-binding component; Belongs to the ABC transporter superfamily | 0.898 |
| CN09_03875 | polA | CN09_03875 | CN09_13050 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.892 |
| CN09_03875 | pstS | CN09_03875 | CN09_10130 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Phosphate abc transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import | 0.874 |
| CN09_03875 | znuC | CN09_03875 | CN09_05935 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Zinc abc transporter atp-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system | 0.804 |
| CN09_06045 | CN09_03875 | CN09_06045 | CN09_03875 | Sugar abc transporter permease; Transport permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.838 |
| CN09_06045 | ccmB | CN09_06045 | CN09_28245 | Sugar abc transporter permease; Transport permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Heme transporter; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes | 0.875 |
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