CN09_03960 protein (Agrobacterium rhizogenes)

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Score

CN09_03960

UPF0114 protein CN09_03960; Derived by automated computational analysis using gene prediction method- Protein Homology (167 aa)

Predicted Functional Partners:

pheT

0.999

CN09_06240

0.999

CN09_17085

0.786

CN09_04750

0.704

CN09_12885

0.683

asd

0.681

CN09_28455

0.652

hemE

0.652

murI

0.652

CN09_21615

0.582

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_03960	CN09_04750	CN09_03960	CN09_04750	UPF0114 protein CN09_03960; Derived by automated computational analysis using gene prediction method- Protein Homology	Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.704
CN09_03960	CN09_06240	CN09_03960	CN09_06240	UPF0114 protein CN09_03960; Derived by automated computational analysis using gene prediction method- Protein Homology	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	0.999
CN09_03960	CN09_12885	CN09_03960	CN09_12885	UPF0114 protein CN09_03960; Derived by automated computational analysis using gene prediction method- Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.683
CN09_03960	CN09_17085	CN09_03960	CN09_17085	UPF0114 protein CN09_03960; Derived by automated computational analysis using gene prediction method- Protein Homology	Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the PEP-utilizing enzyme family	0.786
CN09_03960	CN09_21615	CN09_03960	CN09_21615	UPF0114 protein CN09_03960; Derived by automated computational analysis using gene prediction method- Protein Homology	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.582
CN09_03960	CN09_28455	CN09_03960	CN09_28455	UPF0114 protein CN09_03960; Derived by automated computational analysis using gene prediction method- Protein Homology	Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)	0.652
CN09_03960	asd	CN09_03960	CN09_17835	UPF0114 protein CN09_03960; Derived by automated computational analysis using gene prediction method- Protein Homology	Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family	0.681
CN09_03960	hemE	CN09_03960	CN09_17710	UPF0114 protein CN09_03960; Derived by automated computational analysis using gene prediction method- Protein Homology	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	0.652
CN09_03960	murI	CN09_03960	CN09_06570	UPF0114 protein CN09_03960; Derived by automated computational analysis using gene prediction method- Protein Homology	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis	0.652
CN09_03960	pheT	CN09_03960	CN09_13825	UPF0114 protein CN09_03960; Derived by automated computational analysis using gene prediction method- Protein Homology	Phenylalanine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	0.999
CN09_04750	CN09_03960	CN09_04750	CN09_03960	Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	UPF0114 protein CN09_03960; Derived by automated computational analysis using gene prediction method- Protein Homology	0.704
CN09_04750	CN09_06240	CN09_04750	CN09_06240	Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	0.993
CN09_04750	CN09_17085	CN09_04750	CN09_17085	Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the PEP-utilizing enzyme family	0.999
CN09_04750	asd	CN09_04750	CN09_17835	Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family	0.994
CN09_04750	hemE	CN09_04750	CN09_17710	Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	0.991
CN09_04750	murI	CN09_04750	CN09_06570	Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis	0.870
CN09_06240	CN09_03960	CN09_06240	CN09_03960	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	UPF0114 protein CN09_03960; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_06240	CN09_04750	CN09_06240	CN09_04750	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.993
CN09_06240	CN09_17085	CN09_06240	CN09_17085	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the PEP-utilizing enzyme family	0.976
CN09_06240	hemE	CN09_06240	CN09_17710	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	0.641

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