Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CN09_17085 | CN09_23555 | CN09_17085 | CN09_23555 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.999 |
| CN09_17085 | fhs | CN09_17085 | CN09_03965 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | Belongs to the formate--tetrahydrofolate ligase family | 0.999 |
| CN09_17085 | guaA | CN09_17085 | CN09_14055 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | Gmp synthase; Catalyzes the synthesis of GMP from XMP | 0.999 |
| CN09_17085 | metH | CN09_17085 | CN09_04750 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate | 0.999 |
| CN09_17085 | purH | CN09_17085 | CN09_17805 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | Phosphoribosylaminoimidazolecarboxamide formyltransferase; Bifunctional purine biosynthesis protein PurH; Involved in de novo purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.918 |
| CN09_23555 | CN09_17085 | CN09_23555 | CN09_17085 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | 0.999 |
| CN09_23555 | fdhD | CN09_23555 | CN09_27785 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology | Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH | 0.634 |
| CN09_23555 | fhs | CN09_23555 | CN09_03965 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology | Belongs to the formate--tetrahydrofolate ligase family | 0.958 |
| CN09_23555 | glyA | CN09_23555 | CN09_10385 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism | 0.505 |
| CN09_23555 | guaA | CN09_23555 | CN09_14055 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology | Gmp synthase; Catalyzes the synthesis of GMP from XMP | 0.446 |
| CN09_23555 | metH | CN09_23555 | CN09_04750 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate | 0.691 |
| CN09_23555 | nnrD | CN09_23555 | CN09_07485 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology | Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | 0.953 |
| CN09_23555 | putA | CN09_23555 | CN09_23575 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology | Transcriptional regulator; Oxidizes proline to glutamate for use as a carbon and nitrogen source | 0.999 |
| fdhD | CN09_23555 | CN09_27785 | CN09_23555 | Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.634 |
| fdhD | fhs | CN09_27785 | CN09_03965 | Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH | Belongs to the formate--tetrahydrofolate ligase family | 0.926 |
| fdhD | purH | CN09_27785 | CN09_17805 | Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH | Phosphoribosylaminoimidazolecarboxamide formyltransferase; Bifunctional purine biosynthesis protein PurH; Involved in de novo purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.784 |
| fhs | CN09_17085 | CN09_03965 | CN09_17085 | Belongs to the formate--tetrahydrofolate ligase family | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | 0.999 |
| fhs | CN09_23555 | CN09_03965 | CN09_23555 | Belongs to the formate--tetrahydrofolate ligase family | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.958 |
| fhs | fdhD | CN09_03965 | CN09_27785 | Belongs to the formate--tetrahydrofolate ligase family | Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH | 0.926 |
| fhs | gcvP | CN09_03965 | CN09_06885 | Belongs to the formate--tetrahydrofolate ligase family | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | 0.999 |
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