CN09_04105 protein (Agrobacterium rhizogenes)

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gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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Score

CN09_04105

RNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (941 aa)

Predicted Functional Partners:

CN09_04100

0.989

CN09_04110

0.988

CN09_04115

0.955

CN09_04130

0.860

CN09_04125

0.860

CN09_04120

0.860

CN09_04095

0.847

CN09_27485

0.781

CN09_02050

0.697

CN09_10335

0.655

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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node1	node2	node1 annotation	node2 annotation	score
CN09_02050	CN09_04100	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.699
CN09_02050	CN09_04105	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	RNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.697
CN09_02050	CN09_04110	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.566
CN09_02050	CN09_10335	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.445
CN09_02050	CN09_27485	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.733
CN09_04095	CN09_04100	Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.850
CN09_04095	CN09_04105	Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	RNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.847
CN09_04095	CN09_04110	Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.852
CN09_04095	CN09_04115	Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	ATPase AAA; Derived by automated computational analysis using gene prediction method- Protein Homology	0.772
CN09_04095	CN09_04120	Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.520
CN09_04095	CN09_04125	Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method- Protein Homology	0.533
CN09_04095	CN09_04130	Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Poly(A) polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.557
CN09_04100	CN09_02050	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.699
CN09_04100	CN09_04095	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.850
CN09_04100	CN09_04105	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	RNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.989
CN09_04100	CN09_04110	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.997
CN09_04100	CN09_04115	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	ATPase AAA; Derived by automated computational analysis using gene prediction method- Protein Homology	0.992
CN09_04100	CN09_04120	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.860
CN09_04100	CN09_04125	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method- Protein Homology	0.860
CN09_04100	CN09_04130	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Poly(A) polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.860