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CN09_04110 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_04110" - Uncharacterized protein in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_04110Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (306 aa)    
Predicted Functional Partners:
CN09_04115
ATPase AAA; Derived by automated computational analysis using gene prediction method- Protein Homology (337 aa)
     
  0.997
CN09_04100
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (690 aa)
 
     
  0.997
CN09_04105
RNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (941 aa)
 
          0.988
CN09_16480
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (618 aa)
 
     
  0.889
CN09_04130
Poly(A) polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology (418 aa)
 
          0.877
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (520 aa)
              0.876
CN09_04125
DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
              0.860
CN09_04120
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (207 aa)
              0.860
CN09_04095
Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (141 aa)
              0.852
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (954 aa)
              0.841
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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