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CN09_04125 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_04125" - DNA mismatch repair protein MutT in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_04125DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)    
Predicted Functional Partners:
CN09_04130
Poly(A) polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology (418 aa)
         
  0.957
CN09_04120
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (207 aa)
              0.954
CN09_04115
ATPase AAA; Derived by automated computational analysis using gene prediction method- Protein Homology (337 aa)
         
  0.876
CN09_04110
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (306 aa)
              0.860
CN09_04105
RNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (941 aa)
              0.860
CN09_04100
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (690 aa)
              0.860
CN09_04085
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (189 aa)
 
          0.773
CN09_16700
RNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family (416 aa)
   
        0.756
sseA
3-mercaptopyruvate sulfurtransferase; Catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; Derived by automated computational analysis using gene prediction method- Protein Homology (285 aa)
 
        0.750
hslO
33 kDa chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress (329 aa)
              0.744
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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