CN09_04255 protein (Agrobacterium rhizogenes)

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

CN09_04255

Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+ (63 aa)

Predicted Functional Partners:

CN09_04260

0.640

ctc

0.617

CN09_04265

0.439

CN09_04270

0.403

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_04255	CN09_04260	CN09_04255	CN09_04260	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.640
CN09_04255	CN09_04265	CN09_04255	CN09_04265	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.439
CN09_04255	CN09_04270	CN09_04255	CN09_04270	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.403
CN09_04255	ctc	CN09_04255	CN09_04250	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance	0.617
CN09_04260	CN09_04255	CN09_04260	CN09_04255	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.640
CN09_04260	CN09_04265	CN09_04260	CN09_04265	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.591
CN09_04260	CN09_04270	CN09_04260	CN09_04270	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.715
CN09_04260	ctc	CN09_04260	CN09_04250	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance	0.498
CN09_04265	CN09_04255	CN09_04265	CN09_04255	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.439
CN09_04265	CN09_04260	CN09_04265	CN09_04260	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.591
CN09_04265	CN09_04270	CN09_04265	CN09_04270	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.822
CN09_04270	CN09_04255	CN09_04270	CN09_04255	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.403
CN09_04270	CN09_04260	CN09_04270	CN09_04260	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.715
CN09_04270	CN09_04265	CN09_04270	CN09_04265	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.822
ctc	CN09_04255	CN09_04250	CN09_04255	50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.617
ctc	CN09_04260	CN09_04250	CN09_04260	50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.498

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Coexpression

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