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CN09_04445 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_04445" - Glycosyl transferase family 1 in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_04445Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology (356 aa)    
Predicted Functional Partners:
greA
Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides (158 aa)
         
  0.992
CN09_16320
3-deoxy-D-manno-octulosonic acid transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (439 aa)
       
  0.903
CN09_13625
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (662 aa)
 
   
  0.842
CN09_01950
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (248 aa)
 
     
  0.760
CN09_12650
UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
 
 
  0.757
CN09_12645
UDP-N-acetyl-D-galactosamine dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (427 aa)
 
   
  0.752
moaA
GTP 3’,8-cyclase; Catalyzes the cyclization of GTP to (8S)-3’,8-cyclo-7,8- dihydroguanosine 5’-triphosphate; Belongs to the radical SAM superfamily. MoaA family (349 aa)
   
        0.736
CN09_02910
UDP-glucuronate 5-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology (334 aa)
   
 
  0.717
CN09_05910
Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
 
   
  0.709
CN09_30470
Asparagine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (653 aa)
 
   
  0.709
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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