CN09_04490 protein (Agrobacterium rhizogenes)

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Score

CN09_04490

UPF0310 protein CN09_04490; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0310 family (190 aa)

Predicted Functional Partners:

CN09_34115

0.715

CN09_01390

0.618

CN09_17575

0.607

CN09_04485

0.580

CN09_29025

0.549

CN09_03955

0.517

CN09_03935

0.479

CN09_04545

0.434

CN09_09025

0.412

CN09_10600

0.406

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_01390	CN09_04490	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	UPF0310 protein CN09_04490; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0310 family	0.618
CN09_03935	CN09_03955	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.722
CN09_03935	CN09_04490	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	UPF0310 protein CN09_04490; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0310 family	0.479
CN09_03935	CN09_04545	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.772
CN09_03935	CN09_09025	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.718
CN09_03935	CN09_10600	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.611
CN09_03955	CN09_03935	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.722
CN09_03955	CN09_04490	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	UPF0310 protein CN09_04490; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0310 family	0.517
CN09_03955	CN09_04545	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.637
CN09_03955	CN09_09025	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.729
CN09_03955	CN09_10600	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.671
CN09_04485	CN09_04490	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology	UPF0310 protein CN09_04490; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0310 family	0.580
CN09_04485	CN09_17575	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily	0.584
CN09_04490	CN09_01390	UPF0310 protein CN09_04490; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0310 family	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.618
CN09_04490	CN09_03935	UPF0310 protein CN09_04490; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0310 family	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.479
CN09_04490	CN09_03955	UPF0310 protein CN09_04490; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0310 family	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.517
CN09_04490	CN09_04485	UPF0310 protein CN09_04490; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0310 family	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology	0.580
CN09_04490	CN09_04545	UPF0310 protein CN09_04490; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0310 family	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.434
CN09_04490	CN09_09025	UPF0310 protein CN09_04490; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0310 family	Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.412
CN09_04490	CN09_10600	UPF0310 protein CN09_04490; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0310 family	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.406