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CN09_04725 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_04725" - Polysaccharide biosynthesis protein GumK in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_04725Polysaccharide biosynthesis protein GumK; Derived by automated computational analysis using gene prediction method- Protein Homology (403 aa)    
Predicted Functional Partners:
CN09_28775
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology (400 aa)
 
     
  0.850
CN09_04730
Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (502 aa)
 
   
  0.793
CN09_13615
Cellulase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family (359 aa)
 
   
  0.764
CN09_13610
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (411 aa)
 
     
  0.739
CN09_15710
Succinoglycan biosynthesis protein exop; Derived by automated computational analysis using gene prediction method- Protein Homology (631 aa)
 
   
  0.731
CN09_34310
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (565 aa)
   
          0.727
CN09_05180
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (465 aa)
 
   
  0.725
CN09_25195
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (532 aa)
 
          0.719
CN09_04545
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (481 aa)
   
          0.715
CN09_04735
Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)
 
     
  0.700
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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