CN09_04930 protein (Agrobacterium rhizogenes)

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Score

CN09_04930

Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology (414 aa)

Predicted Functional Partners:

CN09_15290

0.999

CN09_01860

0.986

CN09_08270

0.953

guaB

0.927

CN09_01840

0.813

CN09_07325

0.813

CN09_11975

0.806

lipA

0.784

rpmJ

0.777

ksgA

0.766

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01840	CN09_04930	CN09_01840	CN09_04930	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.813
CN09_01840	CN09_15290	CN09_01840	CN09_15290	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.643
CN09_01860	CN09_04930	CN09_01860	CN09_04930	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.986
CN09_01860	CN09_08270	CN09_01860	CN09_08270	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_01860	CN09_15290	CN09_01860	CN09_15290	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.932
CN09_01860	guaB	CN09_01860	CN09_16005	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family	0.908
CN09_01860	ksgA	CN09_01860	CN09_10685	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits	0.993
CN09_04930	CN09_01840	CN09_04930	CN09_01840	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.813
CN09_04930	CN09_01860	CN09_04930	CN09_01860	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	0.986
CN09_04930	CN09_07325	CN09_04930	CN09_07325	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.813
CN09_04930	CN09_08270	CN09_04930	CN09_08270	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.953
CN09_04930	CN09_11975	CN09_04930	CN09_11975	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology	Subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; Derived by automated computational analysis using gene prediction method- Protein Homology	0.806
CN09_04930	CN09_15290	CN09_04930	CN09_15290	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_04930	guaB	CN09_04930	CN09_16005	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology	Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family	0.927
CN09_04930	ksgA	CN09_04930	CN09_10685	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits	0.766
CN09_04930	lipA	CN09_04930	CN09_07790	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology	Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives	0.784
CN09_04930	rpmJ	CN09_04930	CN09_02055	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology	50S ribosomal protein L36; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bL36 family	0.777
CN09_07325	CN09_04930	CN09_07325	CN09_04930	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.813
CN09_07325	CN09_08270	CN09_07325	CN09_08270	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.993
CN09_07325	CN09_11975	CN09_07325	CN09_11975	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; Derived by automated computational analysis using gene prediction method- Protein Homology	0.406

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