STRINGSTRING
CN09_04935 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_04935" - Glycoside hydrolase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_04935Glycoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (263 aa)    
Predicted Functional Partners:
CN09_04930
Lytic transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology (414 aa)
         
  0.677
CN09_04940
Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
 
          0.591
CN09_04945
S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (415 aa)
 
          0.583
CN09_05755
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (246 aa)
 
          0.485
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
         
  0.425
CN09_24435
Peptide synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (1347 aa)
 
          0.424
CN09_04925
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (306 aa)
              0.401
CN09_04950
6-aminohexanoate hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (462 aa)
         
  0.400
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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