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CN09_05270 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_05270" - Uncharacterized protein in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_05270Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1234 aa)    
Predicted Functional Partners:
CN09_05265
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (470 aa)
              0.852
CN09_14585
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method- Protein Homology (761 aa)
              0.842
CN09_06325
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method- Protein Homology (770 aa)
              0.842
CN09_06795
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1139 aa)
 
          0.837
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
 
          0.837
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (367 aa)
              0.812
CN09_06440
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (2225 aa)
 
          0.783
CN09_15085
Regulatory protein; Derived by automated computational analysis using gene prediction method- Protein Homology (410 aa)
   
          0.774
CN09_10445
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (395 aa)
   
          0.767
CN09_14760
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (199 aa)
   
          0.763
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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