Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CN09_05300 | CN09_05305 | CN09_05300 | CN09_05305 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.925 |
| CN09_05300 | CN09_05310 | CN09_05300 | CN09_05310 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.899 |
| CN09_05305 | CN09_05300 | CN09_05305 | CN09_05300 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.925 |
| CN09_05305 | CN09_05310 | CN09_05305 | CN09_05310 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.614 |
| CN09_05305 | CN09_13755 | CN09_05305 | CN09_13755 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.540 |
| CN09_05305 | nnrD | CN09_05305 | CN09_07485 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | 0.920 |
| CN09_05305 | queG | CN09_05305 | CN09_14120 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.456 |
| CN09_05305 | ruvC | CN09_05305 | CN09_02305 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group | 0.470 |
| CN09_05305 | ureB | CN09_05305 | CN09_03105 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | Belongs to the urease beta subunit family | 0.476 |
| CN09_05310 | CN09_05300 | CN09_05310 | CN09_05300 | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.899 |
| CN09_05310 | CN09_05305 | CN09_05310 | CN09_05305 | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.614 |
| CN09_13755 | CN09_05305 | CN09_13755 | CN09_05305 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.540 |
| CN09_13755 | nnrD | CN09_13755 | CN09_07485 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | 0.470 |
| nnrD | CN09_05305 | CN09_07485 | CN09_05305 | Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.920 |
| nnrD | CN09_13755 | CN09_07485 | CN09_13755 | Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.470 |
| nnrD | queG | CN09_07485 | CN09_14120 | Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | annotation not available | 0.997 |
| nnrD | ruvC | CN09_07485 | CN09_02305 | Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group | 0.876 |
| queG | CN09_05305 | CN09_14120 | CN09_05305 | annotation not available | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.456 |
| queG | nnrD | CN09_14120 | CN09_07485 | annotation not available | Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | 0.997 |
| queG | ruvC | CN09_14120 | CN09_02305 | annotation not available | Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group | 0.718 |
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