CN09_05405 protein (Agrobacterium rhizogenes)

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CN09_05405

Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (296 aa)

Predicted Functional Partners:

CN09_10375

0.974

CN09_02455

0.957

ispDF

0.931

miaA

0.918

radA

0.917

CN09_15420

0.907

polA

0.877

CN09_15290

0.867

CN09_05400

0.847

CN09_17085

0.841

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_02455	CN09_05405	CN09_02455	CN09_05405	Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine	Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.957
CN09_05400	CN09_05405	CN09_05400	CN09_05405	GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.847
CN09_05400	miaA	CN09_05400	CN09_05410	GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family	0.699
CN09_05405	CN09_02455	CN09_05405	CN09_02455	Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine	0.957
CN09_05405	CN09_05400	CN09_05405	CN09_05400	Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.847
CN09_05405	CN09_10375	CN09_05405	CN09_10375	Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	0.974
CN09_05405	CN09_15290	CN09_05405	CN09_15290	Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.867
CN09_05405	CN09_15420	CN09_05405	CN09_15420	Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method- Protein Homology	0.907
CN09_05405	CN09_17085	CN09_05405	CN09_17085	Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the PEP-utilizing enzyme family	0.841
CN09_05405	ispDF	CN09_05405	CN09_07765	Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF)	0.931
CN09_05405	miaA	CN09_05405	CN09_05410	Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family	0.918
CN09_05405	polA	CN09_05405	CN09_13050	Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.877
CN09_05405	radA	CN09_05405	CN09_10800	Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3’ invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA’s homology-searching function	0.917
CN09_10375	CN09_05405	CN09_10375	CN09_05405	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.974
CN09_10375	CN09_15290	CN09_10375	CN09_15290	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_10375	CN09_17085	CN09_10375	CN09_17085	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the PEP-utilizing enzyme family	0.999
CN09_10375	ispDF	CN09_10375	CN09_07765	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF)	0.999
CN09_10375	miaA	CN09_10375	CN09_05410	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family	0.720
CN09_10375	polA	CN09_10375	CN09_13050	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.975
CN09_15290	CN09_05405	CN09_15290	CN09_05405	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.867

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