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CN09_05545 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_05545" - AraC family transcriptional regulator in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
CN09_05545AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)    
Predicted Functional Partners:
CN09_05540
Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (347 aa)
              0.596
CN09_05550
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (219 aa)
         
  0.596
ilvC
Ketol-acid reductoisomerase (NADP(+)); Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate; Belongs to the ketol-acid reductoisomerase family (339 aa)
              0.483
CN09_19850
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (311 aa)
 
 
 
  0.446
CN09_30355
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (324 aa)
 
 
 
  0.443
CN09_14830
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (275 aa)
 
 
 
  0.431
CN09_00360
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
 
          0.421
CN09_26095
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
   
          0.412
CN09_05240
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (301 aa)
 
 
 
  0.401
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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