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CN09_05595 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_05595" - ABC transporter permease in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
CN09_05595ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (564 aa)    
Predicted Functional Partners:
CN09_05590
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
 
     
  0.987
CN09_05600
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (343 aa)
     
  0.952
CN09_05605
Endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (370 aa)
 
     
  0.663
CN09_05585
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (352 aa)
              0.540
CN09_05610
DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method- Protein Homology (250 aa)
         
  0.537
CN09_22040
Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (342 aa)
 
     
  0.499
CN09_13005
Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (338 aa)
   
   
  0.470
thiQ
Thiamine import ATP-binding protein ThiQ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system (242 aa)
   
  0.455
nnrD
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (491 aa)
              0.443
CN09_22505
Iron ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (355 aa)
         
  0.418
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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