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CN09_05730 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_05730" - Uncharacterized protein in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_05730Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (212 aa)    
Predicted Functional Partners:
CN09_05700
Drug-proton antiporter; Derived by automated computational analysis using gene prediction method- Protein Homology (681 aa)
 
     
  0.999
CN09_05725
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (100 aa)
 
          0.964
CN09_05710
Methyltetrahydrofolate-corrinoid methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (321 aa)
 
          0.954
CN09_05740
5-methyltetrahydrofolate--homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (233 aa)
 
          0.932
CN09_05745
Trimethylamine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (526 aa)
 
          0.921
CN09_04750
Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1258 aa)
              0.907
CN09_05715
Methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (365 aa)
 
          0.896
CN09_03645
Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (528 aa)
 
          0.844
CN09_05770
Catalyzes the formation of methionine from L-homocysteine and S-adenosyl-L-methionine; Derived by automated computational analysis using gene prediction method- Protein Homology (337 aa)
 
          0.808
CN09_05750
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (229 aa)
 
          0.799
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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