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CN09_05765 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_05765" - Lipopolysaccharide biosynthesis protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
CN09_05765Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (614 aa)    
Predicted Functional Partners:
CN09_24525
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (578 aa)
 
   
  0.881
CN09_30500
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (477 aa)
 
     
  0.849
CN09_22475
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (693 aa)
 
 
  0.845
CN09_17565
Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (243 aa)
   
 
  0.820
CN09_25470
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (255 aa)
 
   
  0.810
CN09_30495
Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (487 aa)
 
   
  0.802
CN09_23730
Succinoglycan biosynthesis protein exov; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
         
  0.798
CN09_16040
Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
 
          0.795
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (324 aa)
   
   
  0.792
CN09_24520
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (679 aa)
 
 
  0.786
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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