Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CN09_03935 | CN09_03955 | CN09_03935 | CN09_03955 | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.722 |
CN09_03935 | CN09_05825 | CN09_03935 | CN09_05825 | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.683 |
CN09_03935 | CN09_20310 | CN09_03935 | CN09_20310 | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.727 |
CN09_03935 | CN09_27105 | CN09_03935 | CN09_27105 | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.716 |
CN09_03935 | CN09_33960 | CN09_03935 | CN09_33960 | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.719 |
CN09_03955 | CN09_03935 | CN09_03955 | CN09_03935 | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.722 |
CN09_03955 | CN09_05825 | CN09_03955 | CN09_05825 | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.747 |
CN09_03955 | CN09_20310 | CN09_03955 | CN09_20310 | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.543 |
CN09_03955 | CN09_27105 | CN09_03955 | CN09_27105 | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.527 |
CN09_03955 | CN09_33960 | CN09_03955 | CN09_33960 | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.535 |
CN09_05825 | CN09_03935 | CN09_05825 | CN09_03935 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.683 |
CN09_05825 | CN09_03955 | CN09_05825 | CN09_03955 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.747 |
CN09_05825 | CN09_20310 | CN09_05825 | CN09_20310 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.712 |
CN09_05825 | CN09_27105 | CN09_05825 | CN09_27105 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.708 |
CN09_05825 | CN09_33960 | CN09_05825 | CN09_33960 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.711 |
CN09_05825 | cobN | CN09_05825 | CN09_05820 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Cobalamin biosynthesis protein CobN; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.851 |
CN09_05825 | cobO | CN09_05825 | CN09_05830 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Cobinamide adenolsyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids | 0.851 |
CN09_05825 | cobU | CN09_05825 | CN09_05810 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Cobalamin biosynthesis protein; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate | 0.842 |
CN09_05825 | cobW | CN09_05825 | CN09_05815 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Cobalamin biosynthesis protein CobW; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.843 |
CN09_05825 | polA | CN09_05825 | CN09_13050 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.751 |
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