STRINGSTRING
CN09_06145 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_06145" - Glutathione S-transferase in Agrobacterium rhizogenes
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
CN09_06145Glutathione S-transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (230 aa)    
Predicted Functional Partners:
CN09_06135
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (158 aa)
 
     
  0.947
CN09_06140
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (114 aa)
              0.933
CN09_04580
RNA signal recognition particle 4.5S RNA; Derived by automated computational analysis using gene prediction method- Protein Homology (117 aa)
 
          0.794
CN09_06550
Glutathione S-transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (208 aa)
 
          0.765
CN09_15270
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (167 aa)
              0.728
CN09_12220
Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
 
          0.703
CN09_14020
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (123 aa)
          0.646
CN09_23200
Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method- Protein Homology (116 aa)
 
          0.588
CN09_06150
3-demethylubiquinone-9 3-methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (274 aa)
              0.549
CN09_03780
Polyketide cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (156 aa)
 
     
  0.527
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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