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CN09_06275 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_06275" - Phospho-2-dehydro-3-deoxyheptonate aldolase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_06275Phospho-2-dehydro-3-deoxyheptonate aldolase; Derived by automated computational analysis using gene prediction method- Protein Homology (457 aa)    
Predicted Functional Partners:
CN09_03985
Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method- Protein Homology (729 aa)
   
   
  0.994
CN09_06305
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source (559 aa)
              0.880
CN09_06270
Glutathione reductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (461 aa)
              0.862
CN09_06280
Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method- Protein Homology (141 aa)
              0.859
CN09_34110
Prephenate dehydratase; Catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; Derived by automated computational analysis using gene prediction method- Protein Homology (284 aa)
 
     
  0.834
CN09_28315
Chorismate mutase; Catalyzes the interconversion of chorismate to prephenate; Derived by automated computational analysis using gene prediction method- Protein Homology (100 aa)
   
 
  0.825
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate (233 aa)
         
  0.813
CN09_06255
Phosphoglycolate phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
              0.792
CN09_10845
Transferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the alpha-IPM synthase/homocitrate synthase family (538 aa)
              0.744
cysS
Cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family (463 aa)
              0.744
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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