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CN09_06295 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_06295" - Membrane protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
CN09_06295Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (178 aa)    
Predicted Functional Partners:
CN09_02265
Lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (869 aa)
              0.890
CN09_06300
Cation tolerance protein CutA; Derived by automated computational analysis using gene prediction method- Protein Homology (642 aa)
              0.682
CN09_06285
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (113 aa)
              0.575
CN09_06290
CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (77 aa)
              0.573
CN09_06305
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source (559 aa)
              0.569
CN09_06310
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (275 aa)
              0.477
CN09_17635
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (99 aa)
 
          0.416
CN09_16400
Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (385 aa)
              0.404
CN09_06855
FeS assembly SUF system protein; Derived by automated computational analysis using gene prediction method- Protein Homology (126 aa)
 
          0.401
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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