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CN09_06330 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_06330" - Serine/threonine protein phosphatase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_06330Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (274 aa)    
Predicted Functional Partners:
CN09_15420
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method- Protein Homology (763 aa)
              0.999
CN09_03845
GDP-mannose-dependent alpha-mannosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (368 aa)
   
  0.956
CN09_07865
Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (393 aa)
   
 
  0.915
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
              0.900
CN09_06325
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method- Protein Homology (770 aa)
              0.886
CN09_16320
3-deoxy-D-manno-octulosonic acid transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (439 aa)
     
 
  0.857
CN09_05910
Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
     
 
  0.838
CN09_14585
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method- Protein Homology (761 aa)
              0.837
CN09_14575
Hemolysin; Derived by automated computational analysis using gene prediction method- Protein Homology (292 aa)
 
        0.826
CN09_04945
S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (415 aa)
 
     
  0.804
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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