CN09_06530 protein (Agrobacterium rhizogenes)

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Score

CN09_06530

Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (314 aa)

Predicted Functional Partners:

psuG

0.979

recA

0.752

CN09_07565

0.744

CN09_14720

0.660

CN09_13030

0.656

CN09_14710

0.620

CN09_05855

0.585

gcvP

0.579

CN09_18400

0.562

rpsB

0.518

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_05855	CN09_06530	CN09_05855	CN09_06530	Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.585
CN09_05855	CN09_14720	CN09_05855	CN09_14720	Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway	0.798
CN09_05855	gcvP	CN09_05855	CN09_06885	Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family	0.562
CN09_06530	CN09_05855	CN09_06530	CN09_05855	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.585
CN09_06530	CN09_07565	CN09_06530	CN09_07565	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_06530	CN09_13030	CN09_06530	CN09_13030	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.656
CN09_06530	CN09_14710	CN09_06530	CN09_14710	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.620
CN09_06530	CN09_14720	CN09_06530	CN09_14720	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway	0.660
CN09_06530	CN09_18400	CN09_06530	CN09_18400	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.562
CN09_06530	gcvP	CN09_06530	CN09_06885	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family	0.579
CN09_06530	psuG	CN09_06530	CN09_06525	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	Pseudouridine-5’-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5’- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5’-phosphate glycosidase family	0.979
CN09_06530	recA	CN09_06530	CN09_06535	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	0.752
CN09_06530	rpsB	CN09_06530	CN09_07925	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the universal ribosomal protein uS2 family	0.518
CN09_07565	CN09_06530	CN09_07565	CN09_06530	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_07565	psuG	CN09_07565	CN09_06525	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Pseudouridine-5’-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5’- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5’-phosphate glycosidase family	0.744
CN09_13030	CN09_06530	CN09_13030	CN09_06530	Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.656
CN09_13030	CN09_14720	CN09_13030	CN09_14720	Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway	0.810
CN09_13030	gcvP	CN09_13030	CN09_06885	Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family	0.562
CN09_13030	psuG	CN09_13030	CN09_06525	Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Pseudouridine-5’-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5’- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5’-phosphate glycosidase family	0.445
CN09_14710	CN09_06530	CN09_14710	CN09_06530	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.620

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