STRINGSTRING
CN09_06735 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_06735" - 4-hydroxyphenylacetate 3-monooxygenase in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_067354-hydroxyphenylacetate 3-monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (169 aa)    
Predicted Functional Partners:
CN09_06760
4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (544 aa)
              0.807
CN09_06745
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method- Protein Homology (415 aa)
              0.805
CN09_06740
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)
              0.803
CN09_06765
Competence protein TfoX; Derived by automated computational analysis using gene prediction method- Protein Homology (106 aa)
              0.803
CN09_06755
XdhC/CoxF family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
              0.794
CN09_06750
XdhC/CoxI family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (109 aa)
              0.794
CN09_06730
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (360 aa)
              0.621
CN09_06240
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (535 aa)
 
          0.583
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (367 aa)
         
  0.512
CN09_06725
Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family (228 aa)
              0.477
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
Server load: low (13%) [HD]