Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CN09_00010 | CN09_00040 | CN09_00010 | CN09_00040 | Aminomethyltransferase; Belongs to the GcvT family | Aminomethyltransferase; Belongs to the GcvT family | 0.729 |
| CN09_00010 | gcvP | CN09_00010 | CN09_06885 | Aminomethyltransferase; Belongs to the GcvT family | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | 0.999 |
| CN09_00040 | CN09_00010 | CN09_00040 | CN09_00010 | Aminomethyltransferase; Belongs to the GcvT family | Aminomethyltransferase; Belongs to the GcvT family | 0.729 |
| CN09_00040 | gcvP | CN09_00040 | CN09_06885 | Aminomethyltransferase; Belongs to the GcvT family | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | 0.999 |
| CN09_00750 | gcvP | CN09_00750 | CN09_06885 | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | 0.999 |
| CN09_01655 | gcvP | CN09_01655 | CN09_06885 | Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | 0.999 |
| CN09_01655 | gltB | CN09_01655 | CN09_01825 | Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.912 |
| CN09_01820 | gcvP | CN09_01820 | CN09_06885 | Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | 0.999 |
| CN09_01820 | gltB | CN09_01820 | CN09_01825 | Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.999 |
| CN09_02020 | gcvP | CN09_02020 | CN09_06885 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | 0.999 |
| CN09_02020 | gltB | CN09_02020 | CN09_01825 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.868 |
| CN09_02280 | gcvP | CN09_02280 | CN09_06885 | Belongs to the 5-formyltetrahydrofolate cyclo-ligase family | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | 0.999 |
| CN09_02280 | gltB | CN09_02280 | CN09_01825 | Belongs to the 5-formyltetrahydrofolate cyclo-ligase family | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.783 |
| CN09_02280 | pyk | CN09_02280 | CN09_02010 | Belongs to the 5-formyltetrahydrofolate cyclo-ligase family | Belongs to the pyruvate kinase family | 0.644 |
| gcvP | CN09_00010 | CN09_06885 | CN09_00010 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | Aminomethyltransferase; Belongs to the GcvT family | 0.999 |
| gcvP | CN09_00040 | CN09_06885 | CN09_00040 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | Aminomethyltransferase; Belongs to the GcvT family | 0.999 |
| gcvP | CN09_00750 | CN09_06885 | CN09_00750 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.999 |
| gcvP | CN09_01655 | CN09_06885 | CN09_01655 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family | 0.999 |
| gcvP | CN09_01820 | CN09_06885 | CN09_01820 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde | 0.999 |
| gcvP | CN09_02020 | CN09_06885 | CN09_02020 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.999 |
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