Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CN09_03985 | CN09_06910 | CN09_03985 | CN09_06910 | Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.812 |
| CN09_03985 | CN09_16300 | CN09_03985 | CN09_16300 | Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology | Potassium transporter trka; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family | 0.999 |
| CN09_03985 | CN09_17085 | CN09_03985 | CN09_17085 | Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | 0.999 |
| CN09_03985 | polA | CN09_03985 | CN09_13050 | Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology | In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.999 |
| CN09_03985 | ribB | CN09_03985 | CN09_16765 | Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate | 0.999 |
| CN09_03985 | ribD | CN09_03985 | CN09_10375 | Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology | 5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate | 0.999 |
| CN09_06905 | CN09_06910 | CN09_06905 | CN09_06910 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.969 |
| CN09_06905 | CN09_06915 | CN09_06905 | CN09_06915 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.977 |
| CN09_06905 | CN09_06925 | CN09_06905 | CN09_06925 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | Methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.866 |
| CN09_06905 | CN09_08705 | CN09_06905 | CN09_08705 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.922 |
| CN09_06905 | CN09_16300 | CN09_06905 | CN09_16300 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | Potassium transporter trka; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family | 0.737 |
| CN09_06905 | CN09_17085 | CN09_06905 | CN09_17085 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | 0.785 |
| CN09_06905 | polA | CN09_06905 | CN09_13050 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.833 |
| CN09_06905 | ribB | CN09_06905 | CN09_16765 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate | 0.928 |
| CN09_06910 | CN09_03985 | CN09_06910 | CN09_03985 | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.812 |
| CN09_06910 | CN09_06905 | CN09_06910 | CN09_06905 | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | 0.969 |
| CN09_06910 | CN09_06915 | CN09_06910 | CN09_06915 | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.954 |
| CN09_06910 | CN09_06925 | CN09_06910 | CN09_06925 | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | Methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.868 |
| CN09_06910 | CN09_08705 | CN09_06910 | CN09_08705 | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.824 |
| CN09_06910 | CN09_16300 | CN09_06910 | CN09_16300 | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | Potassium transporter trka; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family | 0.780 |
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