CN09_07010 protein (Agrobacterium rhizogenes)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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experimentally determined

Predicted Interactions

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protein homology

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Score

CN09_07010

Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (230 aa)

Predicted Functional Partners:

CN09_16095

0.744

CN09_16100

0.733

CN09_16105

0.729

CN09_07005

0.724

CN09_07000

0.668

CN09_10850

0.614

CN09_07015

0.568

CN09_07025

0.536

ppa

0.506

htpG

0.461

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_07000	CN09_07005	CN09_07000	CN09_07005	Isoprenylcysteine carboxyl methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.940
CN09_07000	CN09_07010	CN09_07000	CN09_07010	Isoprenylcysteine carboxyl methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.668
CN09_07000	CN09_07015	CN09_07000	CN09_07015	Isoprenylcysteine carboxyl methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Serine dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.454
CN09_07005	CN09_07000	CN09_07005	CN09_07000	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Isoprenylcysteine carboxyl methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.940
CN09_07005	CN09_07010	CN09_07005	CN09_07010	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.724
CN09_07005	CN09_07015	CN09_07005	CN09_07015	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Serine dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.473
CN09_07010	CN09_07000	CN09_07010	CN09_07000	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Isoprenylcysteine carboxyl methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.668
CN09_07010	CN09_07005	CN09_07010	CN09_07005	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.724
CN09_07010	CN09_07015	CN09_07010	CN09_07015	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Serine dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.568
CN09_07010	CN09_07025	CN09_07010	CN09_07025	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.536
CN09_07010	CN09_10850	CN09_07010	CN09_10850	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.614
CN09_07010	CN09_16095	CN09_07010	CN09_16095	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_07010	CN09_16100	CN09_07010	CN09_16100	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	2-hydroxy-acid oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.733
CN09_07010	CN09_16105	CN09_07010	CN09_16105	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	2-hydroxy-acid oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.729
CN09_07010	htpG	CN09_07010	CN09_32535	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Chaperone protein HtpG; Molecular chaperone. Has ATPase activity	0.461
CN09_07010	ppa	CN09_07010	CN09_28110	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions	0.506
CN09_07015	CN09_07000	CN09_07015	CN09_07000	Serine dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	Isoprenylcysteine carboxyl methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.454
CN09_07015	CN09_07005	CN09_07015	CN09_07005	Serine dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.473
CN09_07015	CN09_07010	CN09_07015	CN09_07010	Serine dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.568
CN09_07015	CN09_07025	CN09_07015	CN09_07025	Serine dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744

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