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CN09_07355 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_07355" - LysR family transcriptional regulator in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_07355LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)    
Predicted Functional Partners:
leuD
3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate; Belongs to the LeuD family. LeuD type 1 subfamily (202 aa)
         
  0.659
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family (344 aa)
         
  0.656
leuC
3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate; Belongs to the aconitase/IPM isomerase family. LeuC type 1 subfamily (469 aa)
         
  0.654
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (265 aa)
              0.612
CN09_07350
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (73 aa)
              0.590
trpF
N-(5’-phosphoribosyl)anthranilate isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the TrpF family (222 aa)
              0.514
CN09_07365
Multidrug ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (633 aa)
              0.498
CN09_07360
Multidrug ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (628 aa)
              0.498
CN09_24770
Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (394 aa)
 
 
  0.473
CN09_01825
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1574 aa)
         
  0.472
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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