CN09_07500 protein (Agrobacterium rhizogenes)

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[Homology]

Score

CN09_07500

DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (109 aa)

Predicted Functional Partners:

CN09_28220

0.827

CN09_29175

0.760

ftsJ

0.752

CN09_07640

0.744

CN09_15980

0.730

ccmC

0.696

CN09_28270

0.611

CN09_28080

0.604

CN09_07635

0.579

ccmE

0.569

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_07500	CN09_07635	CN09_07500	CN09_07635	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	2-octaprenyl-6-methoxyphenyl hydroxylase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.579
CN09_07500	CN09_07640	CN09_07500	CN09_07640	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Malonate transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_07500	CN09_15980	CN09_07500	CN09_15980	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Exopolyphosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.730
CN09_07500	CN09_28080	CN09_07500	CN09_28080	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.604
CN09_07500	CN09_28220	CN09_07500	CN09_28220	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.827
CN09_07500	CN09_28270	CN09_07500	CN09_28270	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Probable intracellular septation protein A; Involved in cell division; probably involved in intracellular septation	0.611
CN09_07500	CN09_29175	CN09_07500	CN09_29175	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.760
CN09_07500	ccmC	CN09_07500	CN09_28250	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes	0.696
CN09_07500	ccmE	CN09_07500	CN09_11845	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH	0.569
CN09_07500	ftsJ	CN09_07500	CN09_15985	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit	0.752
CN09_07635	CN09_07500	CN09_07635	CN09_07500	2-octaprenyl-6-methoxyphenyl hydroxylase; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.579
CN09_07640	CN09_07500	CN09_07640	CN09_07500	Malonate transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_15980	CN09_07500	CN09_15980	CN09_07500	Exopolyphosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.730
CN09_15980	ftsJ	CN09_15980	CN09_15985	Exopolyphosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology	Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit	0.976
CN09_28080	CN09_07500	CN09_28080	CN09_07500	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.604
CN09_28220	CN09_07500	CN09_28220	CN09_07500	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.827
CN09_28220	CN09_28270	CN09_28220	CN09_28270	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Probable intracellular septation protein A; Involved in cell division; probably involved in intracellular septation	0.823
CN09_28220	ccmC	CN09_28220	CN09_28250	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes	0.620
CN09_28270	CN09_07500	CN09_28270	CN09_07500	Probable intracellular septation protein A; Involved in cell division; probably involved in intracellular septation	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.611
CN09_28270	CN09_28220	CN09_28270	CN09_28220	Probable intracellular septation protein A; Involved in cell division; probably involved in intracellular septation	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.823

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