Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CN09_01030 | CN09_07525 | CN09_01030 | CN09_07525 | Belongs to the LysR transcriptional regulatory family | Belongs to the LysR transcriptional regulatory family | 0.423 |
CN09_01030 | gltB | CN09_01030 | CN09_01825 | Belongs to the LysR transcriptional regulatory family | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.468 |
CN09_04570 | CN09_07525 | CN09_04570 | CN09_07525 | Belongs to the LysR transcriptional regulatory family | Belongs to the LysR transcriptional regulatory family | 0.543 |
CN09_04570 | gltB | CN09_04570 | CN09_01825 | Belongs to the LysR transcriptional regulatory family | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.468 |
CN09_07525 | CN09_01030 | CN09_07525 | CN09_01030 | Belongs to the LysR transcriptional regulatory family | Belongs to the LysR transcriptional regulatory family | 0.423 |
CN09_07525 | CN09_04570 | CN09_07525 | CN09_04570 | Belongs to the LysR transcriptional regulatory family | Belongs to the LysR transcriptional regulatory family | 0.543 |
CN09_07525 | CN09_07530 | CN09_07525 | CN09_07530 | Belongs to the LysR transcriptional regulatory family | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.605 |
CN09_07525 | CN09_07535 | CN09_07525 | CN09_07535 | Belongs to the LysR transcriptional regulatory family | Nucleoside-diphosphate sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.528 |
CN09_07525 | CN09_12345 | CN09_07525 | CN09_12345 | Belongs to the LysR transcriptional regulatory family | Belongs to the LysR transcriptional regulatory family | 0.412 |
CN09_07525 | CN09_16165 | CN09_07525 | CN09_16165 | Belongs to the LysR transcriptional regulatory family | Belongs to the LysR transcriptional regulatory family | 0.535 |
CN09_07525 | CN09_26670 | CN09_07525 | CN09_26670 | Belongs to the LysR transcriptional regulatory family | Belongs to the LysR transcriptional regulatory family | 0.586 |
CN09_07525 | CN09_27865 | CN09_07525 | CN09_27865 | Belongs to the LysR transcriptional regulatory family | Belongs to the LysR transcriptional regulatory family | 0.477 |
CN09_07525 | gltB | CN09_07525 | CN09_01825 | Belongs to the LysR transcriptional regulatory family | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.468 |
CN09_07530 | CN09_07525 | CN09_07530 | CN09_07525 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Belongs to the LysR transcriptional regulatory family | 0.605 |
CN09_07530 | CN09_07535 | CN09_07530 | CN09_07535 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Nucleoside-diphosphate sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.796 |
CN09_07535 | CN09_07525 | CN09_07535 | CN09_07525 | Nucleoside-diphosphate sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology | Belongs to the LysR transcriptional regulatory family | 0.528 |
CN09_07535 | CN09_07530 | CN09_07535 | CN09_07530 | Nucleoside-diphosphate sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.796 |
CN09_07535 | gltB | CN09_07535 | CN09_01825 | Nucleoside-diphosphate sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.999 |
CN09_12345 | CN09_07525 | CN09_12345 | CN09_07525 | Belongs to the LysR transcriptional regulatory family | Belongs to the LysR transcriptional regulatory family | 0.412 |
CN09_12345 | gltB | CN09_12345 | CN09_01825 | Belongs to the LysR transcriptional regulatory family | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.468 |
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