bamA protein (Agrobacterium rhizogenes) - STRING interaction network

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Score

bamA

Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (777 aa)

Predicted Functional Partners:

bamD

0.999

lpxD

0.998

fabZ

0.987

CN09_07895

0.984

lpxA

0.980

CN09_07865

0.976

CN09_07870

0.974

CN09_09920

0.963

CN09_10335

0.957

CN09_02400

0.947

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_02400	CN09_07895	CN09_02400	CN09_07895	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ompA family	Zinc metalloprotease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.405
CN09_02400	CN09_09920	CN09_02400	CN09_09920	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ompA family	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.854
CN09_02400	bamA	CN09_02400	CN09_07890	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ompA family	Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	0.947
CN09_02400	bamD	CN09_02400	CN09_05090	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ompA family	Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	0.780
CN09_02400	lpxA	CN09_02400	CN09_07875	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ompA family	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	0.428
CN09_02400	lpxD	CN09_02400	CN09_07885	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ompA family	UDP-3-O-acylglucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell; Belongs to the transferase hexapeptide repeat family. LpxD subfamily	0.445
CN09_07865	CN09_07870	CN09_07865	CN09_07870	Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_07865	CN09_07895	CN09_07865	CN09_07895	Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	Zinc metalloprotease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.839
CN09_07865	CN09_09920	CN09_07865	CN09_09920	Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.807
CN09_07865	bamA	CN09_07865	CN09_07890	Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	0.976
CN09_07865	bamD	CN09_07865	CN09_05090	Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	0.493
CN09_07865	fabZ	CN09_07865	CN09_07880	Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs	0.999
CN09_07865	lpxA	CN09_07865	CN09_07875	Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	0.999
CN09_07865	lpxD	CN09_07865	CN09_07885	Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	UDP-3-O-acylglucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell; Belongs to the transferase hexapeptide repeat family. LpxD subfamily	0.999
CN09_07870	CN09_07865	CN09_07870	CN09_07865	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	0.999
CN09_07870	CN09_07895	CN09_07870	CN09_07895	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Zinc metalloprotease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.831
CN09_07870	CN09_09920	CN09_07870	CN09_09920	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.778
CN09_07870	bamA	CN09_07870	CN09_07890	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	0.974
CN09_07870	fabZ	CN09_07870	CN09_07880	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs	0.999
CN09_07870	lpxA	CN09_07870	CN09_07875	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	0.999

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