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CN09_07945 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_07945" - Uncharacterized protein in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_07945Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (395 aa)    
Predicted Functional Partners:
CN09_07940
Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (243 aa)
            0.963
CN09_07935
Endoribonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (155 aa)
            0.956
CN09_07950
HIT family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (142 aa)
              0.881
CN09_07930
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (275 aa)
              0.880
ispDF
Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) (406 aa)
   
        0.821
ate
Putative arginyl-tRNA--protein transferase; May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (258 aa)
 
          0.805
CN09_28175
Putative pterin-4-alpha-carbinolamine dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (101 aa)
              0.744
CN09_08585
Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen (1264 aa)
              0.744
CN09_06305
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source (559 aa)
   
   
  0.735
CN09_26635
Mechanosensitive ion channel protein; Derived by automated computational analysis using gene prediction method- Protein Homology (269 aa)
              0.719
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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