STRINGSTRING
CN09_07985 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_07985" - Enoyl-CoA hydratase in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_07985Enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (266 aa)    
Predicted Functional Partners:
CN09_00155
3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
   
  0.795
CN09_27460
3-hydroxybutyryl-CoA dehydrogenase; Converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; Derived by automated computational analysis using gene prediction method- Protein Homology (292 aa)
   
  0.785
CN09_17135
Enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (277 aa)
   
          0.755
CN09_06255
Phosphoglycolate phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
              0.744
CN09_17345
Enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (277 aa)
   
          0.743
CN09_18435
Enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (277 aa)
   
          0.737
CN09_31535
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (465 aa)
         
  0.731
CN09_22620
4-hydroxybutyrate CoA-transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (455 aa)
 
   
  0.730
CN09_07980
Serine acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (287 aa)
              0.730
CN09_28910
Acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method- Protein Homology (396 aa)
 
 
  0.703
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
Server load: low (7%) [HD]