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CN09_08010 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_08010" - Amino acid ABC transporter substrate-bindnig protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_08010Amino acid ABC transporter substrate-bindnig protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (341 aa)    
Predicted Functional Partners:
CN09_08020
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (384 aa)
 
   
  0.994
CN09_08015
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (394 aa)
 
     
  0.994
CN09_08025
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (257 aa)
 
  0.943
CN09_06915
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
              0.728
CN09_06905
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (332 aa)
              0.726
CN09_08765
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (289 aa)
              0.725
CN09_06910
HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (217 aa)
              0.716
CN09_08710
ATPase AAA; Derived by automated computational analysis using gene prediction method- Protein Homology (438 aa)
              0.666
CN09_31980
Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
 
  0.501
CN09_08005
Cystathionine beta-lyase; Catalyzes the formation of L-homocysteine from cystathionine; Derived by automated computational analysis using gene prediction method- Protein Homology (396 aa)
         
  0.494
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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