CN09_08010 protein (Agrobacterium rhizogenes)

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CN09_08010

Amino acid ABC transporter substrate-bindnig protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family (341 aa)

Predicted Functional Partners:

CN09_08015

0.994

CN09_08020

0.994

CN09_08025

0.943

CN09_06915

0.728

CN09_06905

0.726

CN09_08765

0.725

CN09_06910

0.716

CN09_08710

0.666

CN09_31980

0.501

CN09_08005

0.494

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CN09_06905	CN09_06910	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.968
CN09_06905	CN09_06915	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.975
CN09_06905	CN09_08010	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil	Amino acid ABC transporter substrate-bindnig protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	0.726
CN09_06905	CN09_08020	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.424
CN09_06905	CN09_08710	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology	0.801
CN09_06910	CN09_06905	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil	0.968
CN09_06910	CN09_06915	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.952
CN09_06910	CN09_08010	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter substrate-bindnig protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	0.716
CN09_06910	CN09_08710	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology	0.750
CN09_06915	CN09_06905	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil	0.975
CN09_06915	CN09_06910	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.952
CN09_06915	CN09_08010	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter substrate-bindnig protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	0.728
CN09_06915	CN09_08020	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.440
CN09_06915	CN09_08710	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology	0.795
CN09_08005	CN09_08010	Cystathionine beta-lyase; Catalyzes the formation of L-homocysteine from cystathionine; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter substrate-bindnig protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	0.494
CN09_08005	CN09_08015	Cystathionine beta-lyase; Catalyzes the formation of L-homocysteine from cystathionine; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.441
CN09_08005	CN09_08020	Cystathionine beta-lyase; Catalyzes the formation of L-homocysteine from cystathionine; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.448
CN09_08005	CN09_08710	Cystathionine beta-lyase; Catalyzes the formation of L-homocysteine from cystathionine; Derived by automated computational analysis using gene prediction method: Protein Homology	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology	0.657
CN09_08010	CN09_06905	Amino acid ABC transporter substrate-bindnig protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil	0.726
CN09_08010	CN09_06910	Amino acid ABC transporter substrate-bindnig protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.716

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