Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CN09_06905 | CN09_06910 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.969 |
| CN09_06905 | CN09_06915 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.977 |
| CN09_06905 | CN09_08010 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | Amino acid abc transporter substrate-bindnig protein; Belongs to the bacterial solute-binding protein 3 family | 0.745 |
| CN09_06905 | CN09_08020 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.427 |
| CN09_06905 | CN09_08710 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.810 |
| CN09_06910 | CN09_06905 | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | 0.969 |
| CN09_06910 | CN09_06915 | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.954 |
| CN09_06910 | CN09_08010 | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | Amino acid abc transporter substrate-bindnig protein; Belongs to the bacterial solute-binding protein 3 family | 0.727 |
| CN09_06910 | CN09_08710 | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.761 |
| CN09_06915 | CN09_06905 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | 0.977 |
| CN09_06915 | CN09_06910 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.954 |
| CN09_06915 | CN09_08010 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology | Amino acid abc transporter substrate-bindnig protein; Belongs to the bacterial solute-binding protein 3 family | 0.747 |
| CN09_06915 | CN09_08020 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology | Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.440 |
| CN09_06915 | CN09_08710 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.804 |
| CN09_08005 | CN09_08010 | Cystathionine beta-lyase; Catalyzes the formation of L-homocysteine from cystathionine; Derived by automated computational analysis using gene prediction method: Protein Homology | Amino acid abc transporter substrate-bindnig protein; Belongs to the bacterial solute-binding protein 3 family | 0.499 |
| CN09_08005 | CN09_08015 | Cystathionine beta-lyase; Catalyzes the formation of L-homocysteine from cystathionine; Derived by automated computational analysis using gene prediction method: Protein Homology | Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.443 |
| CN09_08005 | CN09_08020 | Cystathionine beta-lyase; Catalyzes the formation of L-homocysteine from cystathionine; Derived by automated computational analysis using gene prediction method: Protein Homology | Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.447 |
| CN09_08005 | CN09_08710 | Cystathionine beta-lyase; Catalyzes the formation of L-homocysteine from cystathionine; Derived by automated computational analysis using gene prediction method: Protein Homology | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.609 |
| CN09_08010 | CN09_06905 | Amino acid abc transporter substrate-bindnig protein; Belongs to the bacterial solute-binding protein 3 family | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil | 0.745 |
| CN09_08010 | CN09_06910 | Amino acid abc transporter substrate-bindnig protein; Belongs to the bacterial solute-binding protein 3 family | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.727 |
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