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CN09_08370 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_08370" - Acyltransferase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_08370Acyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (380 aa)    
Predicted Functional Partners:
CN09_10375
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (369 aa)
              0.715
CN09_21990
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (356 aa)
 
     
  0.649
CN09_00170
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (91 aa)
 
     
  0.629
CN09_24525
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (578 aa)
 
     
  0.627
CN09_05765
Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (614 aa)
 
     
  0.625
cpsB
Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family (475 aa)
         
  0.604
CN09_30500
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (477 aa)
 
     
  0.596
CN09_09030
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (264 aa)
 
     
  0.591
CN09_24345
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
 
     
  0.589
CN09_23720
Succinoglycan biosynthesis protein exop; Derived by automated computational analysis using gene prediction method- Protein Homology (495 aa)
 
     
  0.570
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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