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CN09_08475 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_08475" - Acetyltransferase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_08475Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (188 aa)    
Predicted Functional Partners:
sseA
3-mercaptopyruvate sulfurtransferase; Catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; Derived by automated computational analysis using gene prediction method- Protein Homology (285 aa)
            0.987
CN09_08465
Ala-tRNA(Pro) hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (245 aa)
 
          0.916
CN09_08460
Cysteine synthase; CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; Derived by automated computational analysis using gene prediction method- Protein Homology (346 aa)
         
  0.898
CN09_08480
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (169 aa)
 
          0.705
CN09_03810
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
 
          0.581
CN09_13545
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (116 aa)
 
     
  0.572
CN09_04285
Xaa-Pro dipeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology (383 aa)
 
          0.478
CN09_08925
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (97 aa)
   
          0.475
CN09_08455
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (276 aa)
 
          0.472
CN09_16775
Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (86 aa)
   
          0.472
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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