CN09_08500 protein (Agrobacterium rhizogenes)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Edges represent protein-protein associations

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

CN09_08500

Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology (119 aa)

Predicted Functional Partners:

CN09_15450

0.782

CN09_17880

0.781

CN09_15750

0.780

CN09_15685

0.780

CN09_27500

0.779

CN09_14760

0.779

CN09_11870

0.779

CN09_08240

0.779

CN09_16650

0.778

CN09_12545

0.778

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_08240	CN09_08500	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology	0.779
CN09_08240	CN09_11870	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.774
CN09_08240	CN09_12545	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.781
CN09_08240	CN09_14760	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.778
CN09_08240	CN09_15450	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.782
CN09_08240	CN09_15685	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.778
CN09_08240	CN09_15750	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.782
CN09_08240	CN09_16650	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.784
CN09_08240	CN09_17880	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.781
CN09_08240	CN09_27500	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.775
CN09_08500	CN09_08240	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.779
CN09_08500	CN09_11870	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.779
CN09_08500	CN09_12545	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.778
CN09_08500	CN09_14760	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.779
CN09_08500	CN09_15450	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.782
CN09_08500	CN09_15685	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.780
CN09_08500	CN09_15750	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.780
CN09_08500	CN09_16650	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.778
CN09_08500	CN09_17880	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.781
CN09_08500	CN09_27500	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.779